Comino: Blue Lagoon, Crystal Lagoon and Sea Caves Boat Tour

If you’re dreaming of a day on the Maltese waters, this boat tour around Comino offers a fantastic opportunity to explore some of Malta’s most famous natural sights. Promising a smaller group size and personalized attention, this cruise is perfect for travelers who want to see the quirkiest natural landmarks without the chaos of big crowds. It’s a well-rounded package combining stunning scenery, crystal-clear waters, and enough stops to swim, snorkel, and relax.

What draws many travelers to this tour are the famous Blue Lagoon and Crystal Lagoon, both renowned for their striking turquoise waters. Plus, the chance to explore sea caves, elephant-shaped rocks, and other natural formations makes this experience visually unforgettable. A few folks mention that the friendly, knowledgeable crew really makes a difference, adding helpful tips and local insights to enhance the day.

The only caveat? It’s a fast-paced trip, with around four hours of activity packed into a relatively short window. While this means you get to see many sights, it also requires some quick transitions and a bit of planning if you want to take your time in each spot.

This tour suits travelers who want a comprehensive, well-organized cruise without the hassle of large boat crowds. It’s especially appealing to those who love snorkeling, scenic views, and authentic natural beauty.

Key Points

• Small-group experience: Only 24 people on board for a more intimate trip.
• Multiple stops for swimming and snorkeling: Crystal Lagoon and Blue Lagoon are clear highlights.
• Diverse sightseeing: Sea caves, Elephant Rock, Promising Rock, and other formations provide excellent photo opportunities.
• Flexible options at the Blue Lagoon: Swim, relax, or stay onboard — and don’t forget to reserve your QR code in advance if you want to step onto the sand.
• Learn from friendly crew: Guides are praised for their helpfulness and knowledge.
• Value-packed itinerary: Four hours covering multiple iconic sites with all necessary gear included.

You can check availability for your dates here:

What to Expect from the Comino Boat Tour

This tour kicks off from Cirkewwa, a familiar starting point for many travelers exploring Malta. You’ll board a spacious, comfortable boat with only 24 passengers, a refreshing change from the crowded cruise ships that often ferry visitors around the area. As the boat departs, expect to pass the historic Comino Tower, famously featured in The Count of Monte Cristo, adding a touch of cinematic flair to your journey.

First Stop: Crystal Lagoon (45 Minutes)

Within minutes, you’ll cruise along Comino’s golden shoreline to arrive at Crystal Lagoon, often described as a hidden gem. The water here is renowned for its vivid turquoise color, and many say it’s simply breathtaking. It’s an ideal spot to swim, snorkel, and get close to marine life. The calm, shallow waters make it accessible for all levels, and the vibrant marine environment offers plenty of sights beneath the surface.

This stop is all about appreciating nature’s artistry in a more relaxed setting. Several reviewers mention how much they loved the chance to float and relax in this peaceful spot, with one noting, “the water colours were amazing,” even when the weather was slightly cloudy.

Second Stop: Blue Lagoon (1 Hour)

Next, the iconic Blue Lagoon is the star of the show. Famous worldwide, it’s a must-see. Sunlight hits the sandy seabed, creating dazzling blue hues that are practically impossible to capture fully on camera. You’ll get ample time to swim, snorkel, or just lounge on the shoreline.

A key practical point: starting from May 2025, visitors must reserve a QR code online to land on the Blue Lagoon. This is a new regulation aimed at limiting overcrowding. You can choose a time slot—Morning, Afternoon, or Sunset—and the process is free. If you prefer staying on the boat, there’s no need for a QR code, which means you can enjoy the scenery without the hassle.

Many reviews highlight the quality of the water and the joy of exploring marine life in this well-preserved spot. One traveler shared, “the Blue Lagoon was beautiful, but it was busier than other stops,” which is understandable given its fame. The tour offers a great balance of giving enough time to enjoy the lagoon without feeling rushed.

Third Stop: Santa Maria Bay (45 Minutes)

After more scenic cruising, you’ll reach Santa Maria Bay, another excellent swimming and snorkeling location. It’s less crowded than the Blue Lagoon, offering a more relaxed vibe. Many travelers appreciate the serenity of this spot and the chance to walk along the sandy beach or simply soak up the sun.

A reviewer described this stop as “beautiful,” and appreciated the flexibility to explore the area at their own pace. Here, you might also take a walk to explore the surroundings or enjoy some downtime before heading to the caves.

More Great Tours Nearby

Sea Caves and Elephant Rock

The tour wraps up with photo stops at Santa Maria Caves and the striking Elephant Rock. These natural formations make for memorable photos and provide a different perspective on Malta’s coastal geology. Several reviews mention that being on a smaller boat allowed closer access into caves, which larger vessels might not reach — a definite plus for those interested in authentic, up-close encounters with these natural wonders.

The Practicalities

This tour runs approximately 3 to 4 hours, with specific start times you’ll want to verify before booking. It’s hosted by Comino Land Charters Malta and includes several thoughtful amenities: free paddleboards, noodles, and life jackets are available, along with shaded seating to stay cool. Restroom facilities onboard add a level of comfort often overlooked on boat tours.

Pricing is reasonable given the scope of sights and the small group size. The fact that you’re part of a 24-person crew means you won’t be jostling for space or missing out on commentary.

What’s Included and What’s Not

Included are paddleboards, swimming noodles, and the services of a friendly crew. You’ll also get snorkeling gear available for rent, so if you want to explore underwater, plan to bring or rent your own. Food and drinks aren’t included but can be purchased at beach stops or onboard.

Booking and Accessibility

Booking is flexible, with options to reserve and pay later and cancel up to 24 hours in advance. The tour isn’t suitable for pregnant women or those prone to seasickness, so plan accordingly.

The Experience You’ll Love

From the personalized nature of the small boat to the beautiful scenery and friendly crew, many reviews consistently highlight how enjoyable this trip is. For instance, travelers praise guides for their helpfulness and knowledge, making the experience more enriching. One person said, “Jonny was great! Lots of stops for swims in amazing locations,” capturing the relaxed yet adventurous spirit of this cruise.

The stunning water colors and natural beauty of the caves and rock formations** are frequently mentioned as breathtaking and worth the trip alone. While the Blue Lagoon can get crowded, the smaller size of this tour means you avoid the large crowds and get more personal access to the sights.

Who Is This Tour Best For?

This experience is ideal for travelers seeking a balanced day of sightseeing, swimming, and relaxing. If you enjoy snorkeling or paddleboarding, the included gear and stops will be a highlight. The small group atmosphere suits those who want a more personal, less commercialized feel.

It’s particularly suited for adventurous families, couples, or solo travelers eager to see Malta’s natural coastlines without the hassle of busy boats or guided tours packed with strangers. However, it’s not recommended for pregnant women or those with seasickness, given the short but active pace.

Final Thoughts

This boat tour around Comino offers a perfect blend of scenic beauty, marine fun, and natural wonder. It balances the thrill of snorkeling in crystal-clear waters, snapping photos of iconic formations, and relaxing in tranquil bays. The small group size makes it stand out from more commercial options, providing a more genuine and personal experience.

While the itinerary is packed, it’s designed so that you’ll leave with a full sense of the island’s diverse coastal charm. The added amenities like paddleboards and noodles, plus the friendly crew, help make it a hassle-free outing.

For travelers who value authenticity, natural beauty, and good value, this tour is a fantastic way to spend half a day exploring Malta’s most eye-catching sights. It’s a particularly good fit for those who love water activities and scenic landscapes, and who want to skip the crowds and enjoy a more intimate experience.

FAQ

Is there a limit to the number of participants?
Yes, only 24 people are allowed on board, ensuring a more personal experience compared to larger tours.

Do I need to reserve a spot for the Blue Lagoon?
Starting May 2025, yes. You need to obtain a free QR code online in advance, selecting your preferred time slot, unless you plan to stay onboard.

How long is each stop?
Crystal Lagoon and Santa Maria Bay are approximately 45 minutes each, giving enough time for swimming and relaxing. The Blue Lagoon stop lasts about an hour.

Is snorkeling gear included?
No, snorkeling gear can be rented onboard, but it’s not included in the price. It’s recommended to bring your own if you have it.

What’s the major highlight of this tour?
Most travelers agree that Blue Lagoon and Crystal Lagoon are the star attractions, with their unforgettable waters and vibrant marine life.

Is the tour suitable for young children?
Yes, as long as they’re comfortable with short boat rides and swimming. However, it’s not recommended for pregnant women or those prone to seasickness.

In the end, this boat tour delivers a well-rounded taste of Malta’s stunning coastlines with a personal touch. It’s a great pick for anyone craving crystal waters, scenic vistas, and a relaxed pace — all in just a few hours.

You can check availability for your dates here: