From Mellieha: Three Bay Cruise including the Blue Lagoon

Discover Malta’s Best Boat Tour: From Mellieha’s Three Bay Cruise Including the Blue Lagoon

If you’re looking for a relaxed way to see some of Malta’s most breathtaking spots, this Three Bay Cruise from Mellieha offers an appealing combination of scenic views, swimming, and easygoing exploration. With over 140 reviews rating it nearly perfect, this cruise is a popular choice for travelers craving a blend of adventure, comfort, and authentic island charm.

What we really like about this tour is its focus on smaller boats and personalized service. The crew is often praised for their friendliness and helpfulness, making the experience feel more intimate and less like a tourist herd. Plus, the stops at Blue Lagoon and Crystal Lagoon promise plenty of time to swim and relax.

One thing to consider, however, is the requirement to book a government-issued access pass for disembarking at the Blue Lagoon—something you’ll need to plan ahead for, especially in peak seasons. This might add a bit of extra effort, but it’s a small step for such a stunning reward.

This cruise suits travelers who want an easy, scenic day with plenty of swimming and beautiful views—a great fit for families, couples, or solo explorers who appreciate a laid-back pace and well-organized itinerary.

Key Points

• Excellent value for money with multiple swim stops, scenic cruising, and knowledgeable staff.
• Small boat experience provides intimacy and comfort, with a more relaxed atmosphere.
• Three stunning locations—Blue Lagoon, Crystal Lagoon, and Alfa Rock Bay—offering superb swimming and snorkeling.
• Pre-booking of blue lagoon passes is necessary, so plan ahead.
• Flexible options to stay on the boat or explore ashore at Blue Lagoon.
• Great reviews for friendly crew, beautiful scenery, and well-timed stops.

You can check availability for your dates here:

An In-Depth Look at the Tour Experience

Starting from the Marfa Bay jetty in Mellieha, this cruise offers a comfortable departure point, especially if you’re staying nearby. The boat, named Pegasus, is described as relatively small but well-maintained, giving a cozy environment that many travelers find preferable over larger, crowded vessels. The trip lasts around 6 hours, which balances enough time to enjoy each location without feeling rushed.

The Itinerary: What You’ll See and Do

1. Blue Lagoon in Comino

The first stop is at the Blue Lagoon, arguably Malta’s most photographed spot. Its crystal-clear cyan waters and white sandy bottom draw swimmers and snorkelers alike. The typical swim stop here lasts about 1.5 hours, giving you enough time to jump in, explore underwater, or simply relax on the boat. Many reviews mention the tranquility of staying aboard if the crowds are too overwhelming—some prefer to skip ashore at peak times.

A key point to note: as of May 2025, visitors need to pre-book an access pass to disembark at the Blue Lagoon. This government rule is not something the tour provides, but you’ll want to secure your pass early through the official website. Failing to do so could mean missing out on the shore experience, so planning ahead is wise.

2. Crystal Lagoon

Next, the boat heads to the Crystal Lagoon, located on the west side of Comino. This spot is often praised as one of the most sheltered lagoons in the archipelago, with stunning cliffs surrounding its turquoise waters. The stop here lasts about an hour, perfect for a quick swim, snorkel, or exploration of nearby sea caves. The reviews highlight how mesmerizing this place is, especially for snorkelers who enjoy exploring underwater caves and marine life.

3. Alfa Rock Bay in Gozo

The final swim stop takes place at Alfa Rock Bay, a quieter and less crowded locale on the southeast coast of Gozo. It’s described as a secluded small cove with a pebbly beach and pristine surroundings. The typical time in Alfa Rock Bay is around an hour, giving you the chance to relax on the beach, swim, or explore the nearby rocks. Many reviews call this a hidden gem—a peaceful haven away from the summer crowds.

The Return Journey & Highlights

On the way back, the cruise passes by the Santa Maria Caves and the famous Elephant Head rock formation—both notable for their striking natural shapes and photo opportunities. This part of the journey offers a more relaxed, sightseeing vibe, allowing plenty of time to admire the stunning coastline and take photos.

What’s Included & What’s Not

The tour covers scenic cruising, swim stops, toilet facilities, and assistance from friendly crew members. An on-board cash bar offers snacks and beverages, but no included food or drinks—so packing some snacks or cash for extras is advisable. Snorkel gear is available for rental, adding some convenience for underwater explorers.

However, hotel transfers are not included, so you’ll need to make your own way to the departure point at Marfa Bay. It’s a straightforward walk from most nearby accommodations, but if you’re staying farther out, some planning might be necessary.

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The Pros: Why Travelers Love It

Many reviews emphasize the intimacy of the smaller boat and the friendly, attentive staff. Travelers appreciate the ample time at each stop, especially at Blue Lagoon and Crystal Lagoon, which allow for relaxing swims, snorkeling, or just soaking up the sun.

One reviewer praised the value for money, mentioning how the price includes multiple stops and the opportunity to explore three beautiful locations without rushing. Others love the stunning scenery, calling the views “spectacular” and “breathtaking”—a perfect way to enjoy Malta’s coast without complex logistics or excessive costs.

The Cons: What to Keep in Mind

The main potential downside is the crowd at Blue Lagoon, especially during peak season. Some travelers choose to stay on the boat instead of ashore, which can be a more peaceful experience. Also, the pass requirement for disembarking at Blue Lagoon could be a hurdle if you don’t plan ahead; it’s essential to secure your pass online before the trip.

The duration of stops can feel a little rushed at times—particularly at Blue Lagoon, where some wish for an extra 30 minutes to fully enjoy the water or explore the surroundings more leisurely.

Practical Details: What You Need to Know

Price & Value: At around $46 per person, this cruise offers excellent value, considering the multiple swim stops, scenic views, and small-group atmosphere. When compared to larger tours, the intimacy and flexibility make this a compelling choice.

Duration & Timing: The tour lasts about 6 hours, with starting times varying by availability. Check online for your preferred slot and book early, especially since the Blue Lagoon pass requirement might influence your planning.

Meeting Point: The departure point is at Marfa Jetty, directly across from the Riviera Spa Resort. Look for the white boat named ‘Pegasus’. The activity provider’s office is nearby, making check-in straightforward.

What to Bring: Sunscreen, swimwear, towel, sunglasses, sun hat, cash, and motion sickness remedies are recommended. Since boats can sway, packing motion sickness medication might be a good idea if you’re prone to seasickness.

Accessibility: The tour isn’t suitable for mobility-impaired travelers or wheelchair users, and it’s not advisable for those prone to seasickness.

Who Would Enjoy This Tour?

This cruise is ideal for families, couples, and solo travelers seeking a laid-back day—swimming in beautiful waters, enjoying scenic cruises, and exploring some of Malta’s most iconic spots without the hassle of multiple bookings. It’s perfect for those who value personalized service, want ample swim time, and appreciate authentic, natural beauty.

If you’re a snorkeler, you’ll find the locations especially rewarding, with opportunities to explore sea caves and marine life. For travelers who love a small, friendly crew and a more relaxed atmosphere, this tour hits the mark. Just remember to book your blue lagoon pass early and plan your day around the stops.

Frequently Asked Questions (FAQs)

Do I need to book a pass for the Blue Lagoon?
Yes, starting May 2025, visitors must obtain an access pass from the official government website before disembarking at the Blue Lagoon. It’s best to secure this in advance to avoid missing out.

Is food included in the tour?
No, food and drinks are not included, but there is a small cash bar onboard offering snacks and beverages. It’s a good idea to bring some snacks, especially if you plan to stay on the boat during busy times.

How long are the swim stops?
The Blue Lagoon stop is about 1.5 hours, Crystal Lagoon about 1 hour, and Alfa Rock Bay also roughly an hour. These timings give plenty of space for swimming, snorkeling, or relaxing ashore.

Can I stay ashore at Blue Lagoon?
Yes, you can choose to ashore if you have the required pass. Keep in mind that during peak times, the area can get crowded, so some prefer to stay on the boat or enjoy the tranquility of the water.

Is the boat comfortable?
The boat is described as well-maintained, relatively small, and comfortable, with facilities like toilets and showers. It’s not an overly large vessel, which many find makes the experience more personal.

Are snorkeling gear provided?
Snorkel equipment is available for rental at a small fee on a first-come, first-served basis, so consider bringing your own if you plan to snorkel extensively.

What should I bring for the trip?
Sunscreen, swimwear, a towel, sunglasses, a sun hat, cash, and motion sickness remedies are recommended. Be prepared for the sun and the sea breeze.

Is this tour suitable for children or people with mobility issues?
It’s generally better suited for able-bodied travelers who can comfortably get on and off the boat. It’s not recommended for those with mobility impairments or wheelchair users.

Final thoughts: This Three Bay Cruise from Mellieha offers a genuine, enjoyable way to experience Malta’s stunning coastlines without the hassle or crowds often associated with larger tours. With its friendly staff, beautiful stops, and flexible options, it’s a prime choice for travelers wanting a relaxed, scenic, and value-packed day on the water.

Whether you want to hop into the Blue Lagoon’s inviting waters or explore the caves and secluded beaches, this tour provides a well-rounded taste of what Malta’s turquoise waters have to offer—perfect for creating lasting memories in a stunning setting.

You can check availability for your dates here: