Three Bay Cruise Including Blue Lagoon from Mellieha

If you’re looking to add a splash of adventure and natural beauty to your Malta itinerary, the Three Bay Cruise including Blue Lagoon from Mellieha offers an excellent way to do so. This 6-hour boat trip promises a relaxed day exploring some of the archipelago’s most iconic and picturesque spots—perfect for swimmers, snorkellers, or anyone craving a taste of Malta’s coastal charm without the hassle of navigating yourself.

What makes this cruise particularly appealing are two standout features: the chance to swim in crystal-clear waters at three different locations and the relaxed pace that allows plenty of time in each spot. However, a key consideration is the recent requirement to pre-arrange an access pass for disembarking at the Blue Lagoon, which could require some planning in advance. Overall, it’s a solid choice for travelers who enjoy scenic boat rides, stunning views, and a casual day on the water with friends or family.

Ideal for those who want a straightforward, value-packed day that balances sightseeing with ample swimming opportunities, this tour is perfect whether you’re a first-timer or returning visitor seeking a fresh perspective on Malta’s coastline.

Key Points

• Scenic coastal cruise with stops at three gorgeous lagoons and a hidden bay
• Approximately 6 hours of relaxed sailing, swimming, and sightseeing
• Swim and snorkel in turquoise waters at Blue Lagoon, Crystal Lagoon, and Alfa Rock Bay
• Pass by scenic features like Santa Maria Caves and Elephant Head rock during the return
• Pre-booking an access pass is now required for disembarking at Blue Lagoon
• Affordable price for such a comprehensive boat experience, around $46
• Small group feel with up to 55 travelers, ensuring a friendly, intimate atmosphere
• Comfortable amenities on board, including toilets, showers, and a snack bar

What to Expect on the Malta Three Bay Cruise

Starting Point and Duration

The cruise departs from the Marfa Jetty in Mellieha, a conveniently located spot accessible by public transportation and close to many hotels. The journey lasts around 6 hours, including all stops, sailing time, and time spent in each lagoon. The group size is capped at 55, which means a friendly, manageable atmosphere, avoiding the overwhelming feel of larger tours.

The Itinerary: What Makes Each Stop Special

Blue Lagoon in Comino

The first stop is at the Blue Lagoon, arguably Malta’s most famous swimming spot. Expect to spend about 1½ hours here, which the crew and previous travelers agree is enough time to enjoy the stunning scenery without feeling rushed. The lagoon’s crystal-clear waters and white sandy base make it a perfect spot to swim, snorkel, or just soak up the sun.

Recent reviews highlight how much guests appreciated the balance of time—”We were able to stop in 3 locations and spend enough time in each without feeling rushed,” says one traveler. Others loved the rich marine life, which makes snorkeling particularly rewarding.

However, it’s worth noting that disembarking ashore at Blue Lagoon requires a government-issued access pass obtained through the official website. This regulation, starting from May 2025, is designed to manage the number of visitors, so planning ahead is essential.

Crystal Lagoon in Comino

Next, the boat cruises to the Crystal Lagoon on the west side of Comino, where the stop lasts about an hour. It’s a quieter but equally beautiful alternative to Blue Lagoon, especially for those seeking a more sheltered environment. The stunning turquoise waters surrounded by steep cliffs and stunning 360-degree views make it a favorite among snorkelers and divers.

Previous comments praise this stop as “a perfect spot for diving and snorkelling,” with some noting the sea caves within the lagoon that can be explored during your swim. The water here is mesmerizing, and the imposing cliffs provide excellent scenery for photos.

Alfa Rock Bay in Gozo

The third stop takes you to Alfa Rock Bay, a lesser-known gem on the southeast coast of Gozo. It’s a small, deserted islet with a pebbly beach and a pretty cove, making it an ideal spot for a calm, relaxing swim. With about an hour here, you have time to enjoy the pristine, unspoiled environment.

Reviews describe Alfa Rock as “a hidden gem” and “a secret escape,” making it appealing for those wanting a more secluded spot away from crowds. The pebbly beach and gorgeous surroundings are ideal for a peaceful break.

The Return Journey

On the way back, you’ll pass by the Santa Maria Caves—famous for their unique formations—and the Elephant Head rock, which makes for fun photo opportunities. These scenic features add a touch of adventure and natural artistry to your cruise.

Amenities and Extras

The boat is well-equipped with toilets and showers, and a small cash bar offers snacks and beverages, perfect for a quick refreshment. The crew, praised for their friendly and helpful attitude, is there to assist throughout.

The Value of the Tour

At around $46 per person, this cruise offers remarkable value considering it includes scenic sailing, three swim stops, and scenic views. The price is reasonable for a half-day outing with such variety and comfort. The additional benefits of passenger assistance and amenities onboard enhance the experience.

While food and drinks are not included, the cash bar ensures you can grab a quick snack or beverage without disrupting your relaxation. The swimming stops are the main draw—particularly if you love water activities—making this tour ideal for families, couples, or groups eager for sun and sea.

Practical Tips for a Smooth Experience

• Book your access pass for Blue Lagoon in advance, ideally for the morning timeslot, to avoid missing out due to the new regulation.
• Arrive at the Marfa Jetty at least 20 minutes early; boarding closes just before departure.
• Bring swimwear, towels, and sun protection—the Malta sun can be strong.
• Consider a light waterproof bag for your valuables during swimming.
• Seasickness might affect some travelers, so bring motion sickness remedies if needed.
• The tour isn’t suitable for those with mobility issues, as the boat and stops involve some walking and swimming.

The Sum Up: Who Will Love This Tour?

This cruise offers a great balance of scenic beauty, relaxation, and water fun, making it ideal for travelers who want to experience Malta’s coast without the hassle of organizing multiple activities. It’s particularly suitable for those craving multiple swimming spots in a single day, or families looking for an accessible adventure on the water.

If you enjoy stunning views, a relaxed itinerary, and the chance to swim in some of Malta’s clearest waters, this tour should be on your list. The friendly crew, comfortable boat amenities, and impressive scenery ensure a memorable experience—whether you’re a first-time visitor or a seasoned Maltese explorer.

Keep in mind the advance planning needed for the Blue Lagoon disembarkation pass, but once sorted, it’s a straightforward, enjoyable outing that offers a good mix of adventure and relaxation.

FAQ About the Three Bay Cruise from Mellieha

Do I need to book the tour in advance?
Yes, it’s recommended to book at least 18 days ahead to secure your spot and ensure you have enough time to get the Blue Lagoon access pass.

How long do we spend at each stop?
You’ll have approximately 1.5-2 hours at Blue Lagoon, 1 hour at Crystal Lagoon, and 1 hour at Alfa Rock Bay. This gives plenty of time to enjoy swimming, snorkelling, or relaxing.

Is there a way to disembark at Blue Lagoon?
Yes, but you need a government-issued access pass, which must be obtained beforehand via the official website. Without it, disembarking may not be permitted.

Can I bring my own food and drinks?
Food and drinks aren’t included, but a small cash bar on board sells snacks and beverages. You’re encouraged to bring water, especially during hot summer days.

What if the weather is bad?
The operator reserves the right to reschedule or cancel due to poor weather or sea conditions. If canceled, you’ll be offered a different date or a full refund.

Is this tour suitable for children or seniors?
Most travelers can participate, but those with mobility issues or prone to seasickness should take precautions. The tour isn’t recommended for travelers with limited mobility.

Does the tour include snorkeling gear?
The info doesn’t specify, but since snorkeling is popular at these stops, bringing your own mask and snorkel is advisable.

What’s the main highlight of this trip?
Most agree that the Blue Lagoon’s turquoise waters and the peaceful Alfa Rock Bay are the standout moments, offering stunning scenery and memorable swims.

Is this a good value?
Absolutely. For just over $46, you get a scenic cruise, multiple swimming stops, and the chance to see some of Malta’s most iconic coastal features. It’s a well-priced option for a full day of water-based fun.

This detailed review provides the real traveler’s perspective—balancing what’s fantastic and what requires a bit of planning—so you can decide if this Malta boat tour is right for your holiday.